1.

Gul, M., Fakhar, M., & Najumuddin, S. R. (2019). Phosphorylation-dependent activity-based conformational changes in P21-activated kinase family members and screening of novel ATP competitive inhibitors. PloS one, 14(11).

2. 

Malik, S. S., Zia, A., Mubarik, S., Masood, N., Rashid, S., Sherrard, A., ... & Khadim, M. T. (2019). Correlation of MLH1 polymorphisms, survival statistics, in silico assessment and gene downregulation with clinical outcomes among breast cancer cases. Molecular biology reports, 1-10.

Sameera, S. Y., & Rashid, S. (2019). Structural studies of Staphylococcus aureus Sortase inhibiton via Conus venom peptides. Archives of Biochemistry and Biophysics.

Shafique, S., & Rashid, S. (2019). Structural basis of βTrCP1-associated GLI3 processing. Scientific reports, 9(1), 6865.

Bibi, N., Niaz, H., Hupp, T., Kamal, M. A., & Rashid, S. (2019). Screening and Identification of PLK1-Polo Box Binding Peptides by High-Throughput Sequencing of Phage-Selected Libraries. Protein and peptide letters, 26(8), 620-633.

Bibi, N., Rashid, S., Nicholson, J., Malloy, M., O'Neill, R., Blake, D., & Hupp, T. (2019). An Integrative “Omics” Approach, for Identification of Bona Fides PLK1 Associated Biomarker in Esophageal Adenocarcinoma. Current cancer drug targets, 19(9), 742-755.

Shafique, S., & Rashid, S. (2019). Structural basis for renal cancer by the dynamics of pVHL-dependent JADE1 stabilization and β-catenin regulation. Progress in biophysics and molecular biology, 145, 65-77.

Fakhar, M., Gul, M., & Rashid, S. (2018). Antagonistic role of Klotho-derived peptides dynamics in the pancreatic cancer treatment through obstructing WNT-1 and Frizzled binding. Biophysical chemistry, 240, 107-117.

Najumuddin, Fakhar, M., Gul, M., & Rashid, S. (2018). Interactive structural analysis of βTrCP1 and PER2 phosphoswitch binding through dynamics simulation assay. Archives of biochemistry and biophysics.

Ali, W., Shafique, S., & Rashid, S. (2018). Structural characterization of β-catenin and RX-5902 binding to phospho-p68 RNA helicase by molecular dynamics simulation. Progress in biophysics and molecular biology.

Batool, A., Kamal, M. A., Rizvi, S. M. D., & Rashid, S. (2018). Topical discoveries on multi-target approach to manage Alzheimer's Disease. Current drug metabolism.

Younis, S., & Rashid, S. (2017). Alpha conotoxin-BuIA globular isomer is a competitive antagonist for oleoyl-L-alpha-lysophosphatidic acid binding to LPAR6; A molecular dynamics study. PloS one, 12(12), e0189154.

Shafique, S., Ali, W., Kanwal, S., & Rashid, S. (2017). Structural basis for Cullins and RING component inhibition: Targeting E3 ubiquitin pathway conductors for cancer therapeutics. International Journal of Biological Macromolecules.

Channar, P. A., Saeed, A., Larik, F. A., Rashid, S., Iqbal, Q., Rozi, M. ...& Mahar, J. (2017). Design and synthesis of 2, 6-di (substituted phenyl) thiazolo [3, 2-b]-1, 2, 4-triazoles as α-glucosidase and α-amylase inhibitors, co-relative Pharmacokinetics and 3D QSAR and risk analysis. Biomedicine & Pharmacotherapy, 94, 499-513.

Fakhar, M., & Rashid, S. (2017). Targeted inhibition of Klotho binding to fibroblast growth factor 23 prevents hypophosphetemia. Journal of Molecular Graphics and Modelling.9-19.

Raza, S. I., Navid, A. K., Noor, Z., Shah, K., Dar, N. R., Ahmad, W., & Rashid, S. (2017). GLY67ARG substitution in RSPO4 disrupts the WNT signaling pathway due to an abnormal binding pattern with LGRs leading to anonychia. RSC Advances, 7(28), 17357-17366.

17.

Batool, A., Yasmeen, S., & Rashid, S. (2017). T8M mutation in connexin-26 impairs the connexon topology and shifts its interaction paradigm with lipid bilayer leading to non-syndromic hearing loss. Journal of Molecular Liquids, 227, 168-177. 

18.

Shafique, S., & Rashid, S. (2016). Antiviral Drug Acyclovir Exhibits Antitumor Activity via targeting βTrCP1: Molecular Docking and Dynamics Simulation Study. Journal of Molecular Graphics and Modelling, 96-105. bsp;Journal of Molecular Graphics and Modelling, 96-105. 

19.

Shafique, S., Younis, S., Niaz, H., & Rashid, S. (2016). Elucidation, functional clustering and structural characterization of βTrCP1 substrates through a molecular dynamics study. Molecular BioSystems, 12(7), 2233-2246 

20.

Shafique, S., Bibi, N., & Rashid, S. (2016). In silico identification of putative bifunctional Plk1 inhibitors by integrative virtual screening and structural dynamics approach. Journal of theoretical biology, 388, 72-84.

21.

Noor, Z., Afzal, N., & Rashid, S. (2015). Exploration of Novel Inhibitors for Class I Histone Deacetylase Isoforms by QSAR Modeling and Molecular Dynamics Simulation Assays. PloS one, 10(11).

22.

Rashid, S., Bibi, N., Parveen, Z., & Shafique, S. (2015). Inhibition of Janus kinases by tyrosine phosphorylation inhibitor, Tyrphostin AG-490. Journal of Biomolecular Structure and Dynamics, 33(11), 2368-2379 

23.

Al‐Masoudi, N. A., Ali, D. S., Saeed, B., Hartmann, R. W., Engel, M., Rashid, S., & Saeed, A. (2014). New CYP17 hydroxylase inhibitors: synthesis, biological evaluation, QSAR, and molecular docking study of new pregnenolone analogs. Archiv der Pharmazie, 347(12), 896-907.

24.

Parveen, Z., Bibi, Z., Bibi, N., Neesen, J., & Rashid, S. (2014). Disruption of murine Tcte3-3 induces tissue specific apoptosis via co-expression of Anxa5 and Pebp1. Computational biology and chemistry, 53, 214-225. 

25.

Sohail, I., & Rashid, S. (2014). Molecular Dynamics and Regulation of Butyrylcholinesterase Cholinergic Activity by RNA Binding Proteins. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 13(8), 1366-1377. der Pharmazie, 347(12), 896-907.

26.

S Nawaz, M., Parveen, Z., Wang, L., Rashid, S., Q Fatmi, M., & A Kamal, M. (2014). Computational study of human tyrosine hydroxylase mutants to uphold [4-(Propan-2-yl) Phenyl] Carbamic acid as a potential inhibitor. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 13(7), 1169-1174.

27.

Hassan, M., A Sehgal, S., & Rashid, S. (2014). Regulatory cascade of neuronal loss and glucose metabolism. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 13(7), 1232-1245.

28.

Raza, S. I., Muhammad, D., Jan, A., Ali, R. H., Hassan, M., Ahmad, W., & Rashid, S. (2014). In silico analysis of missense mutations in LPAR6 reveals abnormal phospholipid signaling pathway leading to hypotrichosis. PloS one, 9(8), e104756.

29.

Sehgal, S. A., Hassan, M., & Rashid, S. (2014). Pharmacoinformatics elucidation of potential drug targets against migraine to target ion channel protein KCNK18. Drug design, development and therapy, 8, 571.

30.

Hassan, M., A Sehgal, S., & Rashid, S. (2014). Regulatory cascade of neuronal loss and glucose metabolism. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 13(7), 1232-1245

31. 

Sehgal, S. A., Tahir, R. A., Shafique, S., Hassan, M., & Rashid, S. (2014). Molecular modeling and docking analysis of CYP1A1 associated with head and neck cancer to explore its binding regions. J Theor Comput Sci, 1(112), 

32. 

H Greig, N., S Nawaz, M., Rashid, S., & A Kamal, M. (2014). Exploring N1-p-Fluorobenzyl-Cymserine as an Inhibitor of 5-Lipoxygenase as a Candidate for Type 2 Diabetes and Neurodegenerative Disorder Treatment. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 13(2), 197-202

.

33.

Aziz, A., Khan, S., Zimri, F. K., Muhammad, N., Rashid, S., & Ahmad, W. (2014). Novel homozygous mutations in the WNT10B gene underlying autosomal recessive split hand/foot malformation in three consanguineous families. Gene, 534(2), 265-271. 

34.  

Kausar, S., Asif, M., Bibi, N., & Rashid, S. (2013). Comparative Molecular Docking Analysis of Cytoplasmic Dynein Light Chain DYNLL1 with Pilin to Explore the Molecular Mechanism of Pathogenesis Caused by Pseudomonas aeruginosa PAO. PloS one, 8(11).

35.

Bibi, N., Parveen, Z., & Rashid, S. (2013). Identification of potential Plk1 targets in a cell-cycle specific proteome through structural dynamics of kinase and Polo box-mediated interactions. PloS one, 8(8), e70843.

36.

Rashid, S., Parveen, Z., Ferdous, S., & Bibi, N. (2013). Mutually exclusive binding of APPL PH to BAR domain and Reptin regulates β-catenin dependent transcriptional events. Computational biology and chemistry, 47, 48-55.

37.

Ain, Q. U., Seemab, U., Rashid, S., Nawaz, M. S., & Kamal, M. A. (2013). Prediction of structure of human Wnt-CRD (FZD) complex for computational drug repurposing. PloS one, 8(1), e54630.

38.

Khebichat, N., Nekkaz, K., Ghalem, S., Rashid, S., & Kamal, M. A. (2013). Conformational Search on the Tripeptides Structure by Molecular Dynamics: Study of L, L-Gly-Phe-Phe, L, L-Phe-Gly-Phe, and L, L-Phe-Phe-Gly. Drug Designing, 2(106)

39.

Batool, S., Ferdous, S., Kamal, M. A., Iftikhar, H., & Rashid, S. (2013). In silico screening for identification of novel Aurora kinase inhibitors by molecular docking, dynamics simulations and ligand-based hypothesis approaches. Enz. Eng, 2(1)

40.

Seemab, U., ul Ain, Q., Nawaz, M. S., Saeed, Z., & Rashid, S. (2012). TrFAST: A Tool to Predict Signaling Pathway-specific Transcription Factor Binding Sites. Genomics, proteomics & bioinformatics, 10(6), 354-359.

41.

Nawaz, M. S., & Rashid, S. (2012). MotViz: a tool for sequence motif prediction in parallel to structural visualization and analyses. Genomics, proteomics & bioinformatics, 10(1), 35-43.

42.

Qurrat-Ul-Ain, S. U., Nawaz, S., & Rashid, S. (2011). Integrative analyses of conserved WNT clusters and their co-operative behaviour in human breast cancer. Bioinformation, 7(7), 339.

43.

Saqib, M. A. N., Awan, B. M., Sarfraz, M., Khan, M. N., Rashid, S., & Ansar, M. (2011). Genetic analysis of four Pakistani families with achromatopsia and a novel S4 motif mutation of CNGA3. Japanese journal of ophthalmology, 55(6), 676-680.

44.

Torun, A., Rashid, S., Szymanska, E., Pilecka, I., & Miaczynska, M. (2011). Regulation of the canonical Wnt pathway by endocytic proteins. The Febs Journal, 278, 482,

45.

Rashid, S., Grzmil, P., Drenckhahn, J. D., Meinhardt, A., Adham, I., Engel, W., & Neesen, J. (2010). Disruption of the murine dynein light chain gene Tcte3-3 results in asthenozoospermia. Reproduction, 139(1), 99-111.

46.

Rashid, S., Pilecka, I., Torun, A., Olchowik, M., Bielinska, B., & Miaczynska, M. (2009). Endosomal adaptor proteins APPL1 and APPL2 are novel activators of β-catenin/TCF-mediated transcription. Journal of Biological Chemistry, 284(27), 18115-18128.

47.

Rashid, S., Breckle, R., Hupe, M., Geisler, S., Doerwald, N., & Neesen, J. (2006). The murine Dnali1 gene encodes a flagellar protein that interacts with the cytoplasmic dynein heavy chain 1. Molecular reproduction and development, 73(6), 784-794.

48.

Rashid, S. (2006). Bioinformatics resource development in Pakistan: A review. PROCEEDINGS-PAKISTAN ACADEMY OF SCIENCES, 43(4), 295.